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The Chloroflexia are a class of in the . Chloroflexia are typically filamentous, and can move about through bacterial gliding. It is named after the order .


Etymology
The name "Chloroflexi" is a Neolatin plural of "Chloroflexus", which is the name of the first genus described. The noun is a combination of the Greek chloros (χλωρός) meaning "greenish-yellow" and the Latin flexus (of flecto)Lewis, Charlton T. and Charles Short, A Latin Dictionary. Oxford: Clarendon Press, 1879. Online version at Perseus meaning "bent" to mean "a green bending".
(2005). 9780387241432, Springer (orig-pub London: Williams & Wilkins). .
The name is not due to chlorine, an element confirmed as such in 1810 by Sir Humphry Davy and named after its pale green colour.


Taxonomy and molecular signatures
The Chloroflexia class is a group of deep branching photosynthetic bacteria (with the exception of and species) that currently consist of three orders: , Herpetosiphonales, and . The Herpetosiphonales and Kallotenuales each consist of a single genus within its own family, Herpetosiphonaceae ( ) and ( ), respectively, whereas the are more phylogenetically diverse.


Microscopic distinguishing characteristics
Members of the phylum are and stain mostly Gram negative, whereas most bacteria species are and stain , with the Gram positive exceptions of the (low GC Gram positives), (high GC, Gram positives), and the (Gram positive, diderms with thick peptidoglycan).


Genetic distinguishing characteristics
Comparative genomic analysis has recently refined the taxonomy of the class Chloroflexia, dividing the Chloroflexales into the suborder consisting of the families Oscillachloridaceae and , and the suborder containing family . The revised taxonomy was based on the identification of a number of conserved signature indels (CSIs) which serve as highly reliable molecular markers of shared ancestry.


Physiological distinguishing characteristics
Additional support for the division of the Chloroflexales into two suborders is the observed differences in physiological characteristics where each suborder is characterized by distinct , , and profiles that are consistently absent in the other suborder.

In addition to demarcating taxonomic ranks, CSIs may play a role in the unique characteristics of members within the clade: In particular, a four-amino-acid insert in the protein pyruvate flavodoxin/ferredoxin oxidoreductase, a protein which plays important roles in photosynthetic organisms, has been found exclusively among all members in the genus Chloroflexus, and is thought to play an important functional role.

Additional work has been done using CSIs to demarcate the phylogenetic position of Chloroflexia relative to other photosynthetic groups such as the Cyanobacteria. Chloroflexia shares a number of CSIs with in the chlorophyll-synthesizing proteins. As the two lineages are not otherwise closely related, the interpretation is that the CSIs are the result of a horizontal gene transfer event between the two. Chloroflexia in turn acquired these proteins by another HGT from a "Clade C" marine cyanobacteria.


Phylogeny


Taxonomy
The currently accepted taxonomy is as follows:

Class Chloroflexia Gupta et al. 2013

  • Genus ?" " Wu et al. 2002
  • Genus ?" Candidatus " Saghai et al. 2020
  • Genus ?" Candidatus " Nierychlo et al. 2019
  • Order "Chloroheliales" Tsuji et al. 2024
    • Family "Chloroheliaceae" Tsuji et al. 2024
  • Order "Thermobaculales" Chuvochina et al. 2023
    • Family "Thermobaculaceae" Chuvochina et al. 2023
  • Order Kallotenuales Cole et al. 2013
    • Family Kallotenuaceae Cole et al. 2013
  • Order Herpetosiphonales Gupta et al. 2013
    • Family Herpetosiphonaceae Gupta et al. 2013
  • Order Gupta et al. 2013
    • Suborder Gupta et al. 2013
      • Family Roseiflexaceae Gupta et al. 2013 "Kouleotrichaceae"
    • Suborder Gupta et al. 2013
      • Family Chloroflexaceae Gupta et al. 2013
      • Family Oscillochloridaceae Gupta et al. 2013


See also
  • List of bacteria genera
  • List of bacterial orders
  • Green sulfur bacteria


Further reading


External links
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