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Prothrombin ( Coagulation factor II) is encoded in the human by the F2 gene. It is cleaved during the clotting process by the enzyme complex to form thrombin.

Thrombin ( Factor IIa) (, fibrinogenase, thrombase, thrombofort, topical, thrombin-C, tropostasin, activated blood-coagulation factor II, E thrombin, beta-thrombin, gamma-thrombin) is a , that converts fibrinogen into strands of insoluble , as well as catalyzing many other coagulation-related reactions.


History
After the description of fibrinogen and fibrin, Alexander Schmidt hypothesised the existence of an enzyme that converts fibrinogen into fibrin in 1872.

Prothrombin was discovered by Pekelharing in 1894.

(2024). 9780071833011, McGraw-Hill.


Physiology

Synthesis
Thrombin is produced by the enzymatic cleavage of two sites on prothrombin by activated (Xa). The activity of factor Xa is greatly enhanced by binding to activated (Va), termed the complex. Prothrombin is produced in the liver and is co-translationally modified in a -dependent reaction that converts 10-12 in the N terminus of the molecule to gamma-carboxyglutamic acid (Gla). In the presence of calcium, the Gla residues promote the binding of prothrombin to phospholipid bilayers. Deficiency of vitamin K or administration of the anticoagulant inhibits the production of gamma-carboxyglutamic acid residues, slowing the activation of the coagulation cascade.

In human adults, the normal blood level of activity has been measured to be around 1.1 units/mL. Newborn levels of thrombin steadily increase after birth to reach normal adult levels, from a level of around 0.5 units/mL 1 day after birth, to a level of around 0.9 units/mL after 6 months of life.


Mechanism of action
In the blood coagulation pathway, thrombin acts to convert to XIa, to VIIIa, to Va, to , and to XIIIa. In the conversion of fibrinogen into fibrin, thrombin catalyzes the cleavage of and from the respective Aα and Bβ chains of fibrinogen to form fibrin monomers.

is a that catalyzes the formation of covalent bonds between lysine and glutamine residues in fibrin. The covalent bonds increase the stability of the fibrin clot. Thrombin interacts with .

As part of its activity in the coagulation cascade, thrombin also promotes activation and aggregation via activation of protease-activated receptors on the cell membrane of the platelet.


Negative feedback
Thrombin bound to thrombomodulin activates , an inhibitor of the coagulation cascade. The activation of protein C is greatly enhanced following the binding of thrombin to , an integral membrane expressed by cells. Activated protein C inactivates factors Va and VIIIa. Binding of activated protein C to leads to a modest increase in its activity. Thrombin is also inactivated by , a .


Structure
The molecular weight of prothrombin is approximately 72,000 Da. The catalytic domain is released from prothrombin fragment 1.2 to create the active enzyme thrombin, which has a molecular weight of 36,000 Da. Structurally, it is a member of the large of proteases.

Prothrombin is composed of four domains; an N-terminal , two and a C-terminal -like domain. with as a cofactor leads to cleavage of the Gla and two Kringle domains (forming together a fragment called fragment 1.2) and leave thrombin, consisting solely of the serine protease domain.

As is the case for all , is converted to active thrombin by proteolysis of an internal peptide bond, exposing a new N-terminal Ile-NH3. The historic model of activation of serine proteases involves insertion of this newly formed N-terminus of the heavy chain into the promoting the correct conformation of the catalytic residues. Contrary to crystal structures of active thrombin, hydrogen-deuterium exchange mass spectrometry studies indicate that this N-terminal Ile-NH3 does not become inserted into the β-barrel in the apo form of thrombin. However, binding of the active fragment of appears to allosterically promote the active conformation of thrombin by inserting this N-terminal region.


Gene
There are an estimated 30 people in the world that have been diagnosed with the congenital form of Factor II deficiency, which should not be confused with the prothrombin G20210A mutation, which is also called the factor II mutation. Prothrombin G20210A is congenital.

Prothrombin G20210A is not usually accompanied by other factor mutations (i.e., the most common is factor V Leiden). The gene may be inherited (1 pair), or much more rarely, (2 pairs), and is not related to gender or blood type. Homozygous mutations increase the risk of thrombosis more than heterozygous mutations, but the relative increased risk is not well documented. Other potential risks for , such as oral contraceptives may be additive. The previously reported relationship of inflammatory bowel disease (i.e., Crohn's disease or ulcerative colitis) and prothrombin G20210A or Leiden mutation have been contradicted by research.


Role in disease
Activation of prothrombin is crucial in physiological and pathological coagulation. Various rare diseases involving prothrombin have been described (e.g., hypoprothrombinemia). Anti-prothrombin in autoimmune disease may be a factor in the formation of the lupus anticoagulant (also known as antiphospholipid syndrome). Hyperprothrombinemia can be caused by the G20210A mutation.

Thrombin, a potent and , is implicated as a major factor in following subarachnoid hemorrhage. Blood from a ruptured cerebral aneurysm clots around a cerebral , releasing thrombin. This can induce an acute and prolonged narrowing of the blood vessel, potentially resulting in cerebral ischemia and ().

Beyond its key role in the dynamic process of thrombus formation, thrombin has a pronounced pro-inflammatory character, which may influence the onset and progression of atherosclerosis. Acting via its specific cell membrane receptors (protease activated receptors: PAR-1, PAR-3 and PAR-4), which are abundantly expressed in all arterial vessel wall constituents, thrombin has the potential to exert pro-atherogenic actions such as inflammation, leukocyte recruitment into the atherosclerotic plaque, enhanced oxidative stress, migration and proliferation of vascular smooth muscle cells, apoptosis and angiogenesis.

Thrombin is implicated in the physiology of . Its presence indicates the existence of a clot. In 2013 a system for detecting the presence of thrombin was developed in mice. It combines peptide-coated attached to "reporter chemicals". When a peptide binds to a thrombin molecule, the report is released and appears in the where it can be detected. Human testing has not been conducted.


Applications

Research tool
Due to its high proteolytic specificity, thrombin is a valuable biochemical tool. The thrombin cleavage site (Leu-Val-Pro-Arg-Gly-Ser) is commonly included in linker regions of recombinant fusion protein constructs. Following purification of the fusion protein, thrombin can be used to selectively cleave between the and residues of the cleavage site, effectively removing the from the protein of interest with a high degree of specificity.


Medicine and surgery
Prothrombin complex concentrate and fresh frozen plasma are prothrombin-rich coagulation factor preparations that can be used to correct deficiencies (usually due to medication) of prothrombin. Indications include intractable bleeding due to .

Manipulation of prothrombin is central to the mode of action of most . and related drugs inhibit -dependent carboxylation of several coagulation factors, including prothrombin. increases the affinity of antithrombin to thrombin (as well as ). The direct thrombin inhibitors, a newer class of medication, directly inhibit thrombin by binding to its active site.

Recombinant thrombin is available as a powder for reconstitution into . It can be applied during surgery, as an aid to . It can be useful for controlling minor bleeding from capillaries and small venules, but ineffective and not indicated for massive or brisk arterial bleeding.


Food production
Thrombin, combined with , is sold under the brand name Fibrimex for use as a binding agent for meat. Both proteins in Fibrimex derives from or blood. According to the manufacturer it can be used to produce new kinds of mixed meats (for example combining beef and fish seamlessly). The manufacturer also states that it can be used to combine whole muscle meat, form and portion these, thus cutting down on production costs without a loss in quality.

General secretary Jan Bertoft of Swedish Consumers' Association has stated that "there is danger of misleading the consumers since there is no way to tell this reconstituted meat from real meat".


See also


Further reading


External links

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